Vitamin B3: Metabolism and Functions

Cellular & Molecular Biology, Nutrition, Specialized Topics

Last Updated: May 17, 2023

Introduction to Vitamin B3: Nicotinic Acid/Niacin

Vitamin B3 is nicotinic acid, more commonly called niacin. Both nicotinic acid (NA) and nicotinamide (NAM) can serve as the dietary source of the co-factor forms of vitamin B3, nicotinamide adenine dinucleotide (NAD+) and nicotinamide adenine dinucleotide phosphate (NADP+).

Structures of nicotinamide and nicotinic acid
Structures of nicotinamide and nicotinic acid

Synthesis and Salvage of NAD+

With the exception of neurons, human cells cannot transport NAD+ into the cell, therefore, they must synthesize it either de novo or through the pathway involving the amino acid tryptophan. However, due to the critical need for NAD+, most cells recycle the cofactor via salvage pathways as opposed to de novo synthesis. The salvage pathways for NAD+ synthesis take place in both the nucleus and the mitochondria.

Synthesis and salvage of NAD
Pathways of NAD+ synthesis and salvage. The conversion of dietary nicotinic acid (niacin) and nicotinamide to bioactive NAD+ involves the biosynthesis pathway, whereas, resynthesis of NAD+ following it’s consumption in various biological reactions, involves the salvage pathways. Dietary nicotinic acid (NA) is converted to NAD+ in a three-step reaction pathway as outlined in the text. Dietary nicotinamide (NAM), as well as NAM resulting from numerous ADP-ribosylation enzymes and SIRT family deacetylases, is converted/savaged to NAD+ via a two-step reaction pathway as outlined in the text. QPRT: quinolinic acid phosphoribosyltransferase; NAPRT: nicotinic acid phosphoribosyltransferase; NMNAT1: nicotinamide nucleotide adenylyltransferase 1; NADSYN1: NAD synthetase; NADK: NAD kinase; NMRK1: nicotinamide riboside kinase 1; NAMPT: nicotinamide phosphoribosyltransferase

Formation of NAD+ from nicotinamide (NAM) occurs in a two-step process and its formation from nicotinic acid occurs in a three-step process. The three-step pathway of NAD+ synthesis is referred to as the Preiss-Handler pathway. Both reaction pathways require the activated form of ribose, 5-phosphoribosyl 1-pyrophosphate (PRPP). PRPP is the same activated ribose required for nucleotide synthesis. Nicotinamide is converted to nicotinamide mononucleotide (NMN) in what is a salvage pathway utilizing nicotinamide phosphoribosyltransferase.

Nicotinamide phosphoribosyltransferase is encoded by the NAMPT gene. The NAMPT gene is located on chromosome 7q22.3 and is composed of 13 exons that encode a 491 amino acid precursor protein.

Interestingly there was an activity that was identified at high levels in white adipose tissue that was purported to have insulin mimetic effects. This purported activity was originally called visfatin. The protein identified as visfatin was subsequently discovered to be encoded by the NAMPT gene. The level of NAMPT activity changes under different dietary states such as nutrient status, stress, and during exercise. Of clinical significance is the fact that NAMPT levels are reduced in obesity decreasing its role in stress responses. The NAMPT protein is found both intracellularly (identified as iNAMPT) and extracellularly (identified as eNAMPT). Among numerous functions, the activity of NAMPT is required for the regulation of NAD+-dependent deacetylases of the sirtuin (SIRT) family. SIRT enzymes are critical in the regulation of gene expression through their ability to deacetylate histone proteins, thereby altering chromatin structure.

Following the synthesis of NMN, it is then converted to NAD+ through the action of the nicotinamide nucleotide adenylyltransferase (NMNAT) enzymes and ATP. Humans express three NMNAT genes identified as NMNAT1, NMNAT2, and NMNAT3.

The NMNAT1 gene is located on chromosome 1p36.22 and is composed of 9 exons that generate three alternatively spliced mRNAs that collectively encode two distinct protein isoforms. The NMNAT1 encoded proteins are localized to the nucleus.

The NMNAT2 gene is located on chromosome 1q25.3 and is composed of 12 exons that generate two alternatively spliced mRNAs both of which encode distinct protein isoforms. Expression of the NMNAT2 gene is predominantly localized to the brain. The NMNAT2 encoded proteins are found in the cytosol and in the Golgi.

The NMNAT3 gene is located on chromosome 3q23 and is composed of 10 exons that generate 22 alternatively spliced mRNAs collectively encode eight different protein isoforms. The NMNAT3 encoded proteins are localized to the mitochondria.

The distinct localization of the various NMNAT enzymes indicates that there are likely to be distinct pools of NAD+ in the different subcellular organelles and that these pools are independently regulated through the activity of a given NMNAT.

Nicotinic acid (NA) is converted to nicotinate mononucleotide (NAMN) via the action of nicotinate phosphoribosyltransferase which is encoded by the NAPRT gene. The NAPRT gene is located on chromosome 8q24.3 and is composed of 13 exons that generate four alternatively spliced mRNAs each encoding distinct isoforms of the enzyme.

NAMN is then converted to nicotinate adenine dinucleotide (NAAD) by the action of the NMNAT enzymes. NAAD is then converted to NAD+ via the action of NAD synthetase 1 (also called glutamine-dependent NAD synthetase) which is encoded by the NADSYN1 gene. The NADSYN1 gene is located on chromosome 11q13.4 and is composed of 21 exons that encode a 706 amino acid protein.

NAD+ can be converted to NADP+ through the action of cytoplasmic NAD kinase (NADK) or mitochondrial NAD kinase 2 (NADK2). The NADK gene is located on chromosome 1p36.33 and is composed of 19 exons that generate six alternatively spliced mRNAs that collectively generate four distinct isoforms of the enzyme. The NADK2 gene is located on chromosome 5p13.2 and is composed of 15 exons that generate four alternatively spliced mRNAs, that collectively encode three distinct isoforms of the enzyme. Expression of the NADK2 gene is highest in the liver, being 5-6 fold higher there than in any other tissue.

Mitochondrial NAD+

Whereas the localization of the NMNAT3 encoded protein is in the mitochondria, little, if any, synthesis or salvage of NAD+ has been shown to take place within the mitochondria itself. Given that ~70% of the total pool of NAD+ is found in the mitochondria, where it functions in the TCA cycle and in electron transport through complex 1 of the oxidative phosphorylation pathway, its import into this organelle is critical.

Only recently has the mitochondrial NAD+ import transporter been identified. The protein encoded by the SLC25A51 gene is localized to the inner mitochondrial membrane and is required for transport of NAD+ into the matrix of the mitochondria. The SLC25 family of transporters is known as the mitochondrial carrier family. The SLC25A51 encoded protein is also known as mitochondrial carrier triple repeat protein 1, MCART1.

In experiments in cells where the function of SLC25A51 has been ablated, the level of mitochondrial TCA cycle activity is greatly reduced, the level of mitochondrial respiration and electron transport through complex I is greatly reduced, and the levels of mitochondrial NAD+ and NADH are also significantly reduced. These results indicate a critical role for the SLC25A51 encoded transporter in mitochondrial import of NAD+.

Biological Functions of NAD+ and NADP+

NAD+ functions as a cofactor for numerous dehydrogenases including the same critical thiamine-dependent enzymes described above [the pyruvate dehydrogenase complex (PDHc)2-oxoglutarate (α-ketoglutarate) dehydrogenase, and branched-chain α-ketoacid dehydrogenase (BCKD)] as well as lactate dehydrogenase and malate dehydrogenase, for example. NADPH serves as a cofactor for numerous reductive biosynthetic processes including fatty acid synthesischolesterol biosynthesissteroid hormone biosynthesis, and bile acid synthesis. In total NAD+/NADP+ is required for over 500 enzymatic reactions and as such plays a critical role in the regulation of almost all major biological processes.

Outside the context of metabolic pathways that utilize NAD+ or NADP+ in red-ox reactions, NAD+ is required for a wide array of biological processes. There are two major cell signaling pathways that utilize NAD+ as a co-substrate. The sirtuin proteins and the poly-ADP-ribose polymerases (PARP) are all NAD+-dependent enzymes that function in processes that include mitochondrial metabolism, inflammation, meiosis, autophagyapoptosistranscriptional regulationRNA biogenesis and processingDNA damage repair, chromatin remodeling, the unfolded protein response (UPR), and circadian rhythms. The major function of the SIRT proteins is the NAD+-dependent deacetylation of lysine residues in target proteins, particularly histone proteins. During the course of the deacetylation reaction NAM is released and salvaged for synthesis of NAD.

The PARP family of enzymes is encoded by 17 different genes in humans. This family of NAD+-dependent enzymes includes both poly-ADP-ribose polymerases (encoded by the PARP1, 2, and 5 genes) and mono-ADP-ribose transferases (encoded by the PARP3, 4, 6, 10, and 14–16 genes). The reaction catalyzed by PARP enzymes is the cleavage of NAD+ with the subsequent transfer of ADP-ribose to aspartic acid, glutamic acid, and lysine residues on target proteins with the release of NAM. In addition to the PARP family of ADP-ribosylating enzymes, the SIRT4 and SIRT6 encoded enzymes and the arginine-specific ecto-enzymes (ARTC) also possess ADP-ribosylating activity. The process of ADP-ribosylation is a reversible post-translational modification and it’s presence in a protein is recognized by specific binding proteins termed ADP-ribose “readers”.

NAD+ Degradation

NAD+ is degraded in cells primarily via the actions of two related glycohydrolases. These consumption reactions are distinct from the conversion of NAD+ to NADH or to NADP or to the release of NAM in the context of the use of NAD+ by SIRT or PARP enzymes. The two glycohydrolases are encoded by the CD38 and BST1 (bone marrow stromal cell antigen 1) genes. Both of these enzymes convert NAD+ to nicotinamide (NAM) and adenosine diphosphoribose (ADPR). The NAM is then rapidly converted back to NAD+ through the salvage pathways described above.

The CD38 gene is ubiquitously expressed and the encoded enzyme is the major NAD+ degrading enzyme in mammals.

Expression of the BST1 gene is restricted to lymphoid cells and cells of the gut. As humans age the level of CD38 expression increases leading to a concurrent decline in cellular NAD+ levels.

Another NAD+ cleaving enzyme is encoded by the SARM1 (sterile alpha and TIR motif containing 1) gene. Expression of SARM1 is enriched in neural tissues.

Therapeutic Potential for NAD+

Numerous studies have demonstrated an association between the processes of aging and several pathological conditions affecting skeletal muscle, kidney, heart, central nervous system, vision, and hearing with declining levels of NAD+. Specific association between the role of tryptophan in the overall pool of NAD+ and acute kidney injury. The enzyme, quinolinic acid phosphoribosyltransferase (QPRT) is required for tryptophan conversion to NAD+ and reduced levels of this enzyme are associated with acute kidney injury. When patients are given nicotinamide prior to cardiac surgery there is a dose related
increase in circulating NAD+ metabolites and a reduction in acute kidney injury in these patients. High-risk patients with non-melanoma skin cancer have shown reduced incidences of of both basal cell carcinomas and squamous cell carcinomas when taking 500 mg of nicotinamide daily for at least 12 months.

Although NAD+ replacement in laboratory animal has shown correlation to reductions in pathology several studies using nicotinamide riboside (NR) failed to clinical of functional benefit in obese individuals or the elderly. However, studies using nicotinic acid or nicotinamide have shown the potential for replacement therapies involving NAD+ and its precursors. Given that vitamin B3 can exist as nicotinic acid (niacin), nicotinamide, nicotinamide riboside (NR), and nicotinamide mononucleotide (NMN), all of which are capable of supporting NAD+ synthesis, it is not yet clear whether any one of these NAD+ precursors is superior as an NAD+-replacement therapeutic.