2-AG | 2-arachidonoylglycerol, an endocannabinoid |
2,3BPG | 2,3-bisphosphoglycerate |
4EBP1 | translation factor eIF-4E binding protein |
5HT | 5-hydroxytryptamine, serotonin |
AADC | aromatic L-amino acid decarboxylase |
ABC | ATP-binding cassette family of proteins |
ABCA1 | gene symbol for ATP-binding cassette transporter A1 |
ABCB4 | gene symbol for ATP-binding cassette member B4; also called multidrug resistance protein 3, MDR3 |
ABCB11 | gene symbol for ATP-binding cassette member B11; also called bile salt export pump, BSEP |
ABCC2 | gene symbol for ATP-binding cassette, sub-family C, member 2; also called canalicular multispecific organic anion transporter gene, CMOAT or multidrug resistance-associated protein 2 gene, MRP2 |
ABCC8 | gene symbol for ATP-binding cassette, sub-family C, member 8; also called SUR = sulfonylurea receptor, is a component of the K+-ATP channel involved in insulin secretion from pancreas |
ABCD1 | gene symbol for ATP-binding cassette, subfamily D, member 1 |
ABHD5 | α/β-hydrolase domain-containing protein-5; also known as comparative gene identification-58, CGI-58 |
ABP | androgen binding protein |
ACAA1 | gene symbol for acetyl-CoA C-acyltransferase 1 |
ACAA2 | gene symbol for acetyl-CoA C-acyltransferase 2 |
ACADM | gene symbol for acyl-CoA dehydrogenase, medium-chain; protein is also known as medium-chain acyl-CoA dehydrogenase, MCAD |
ACAT1 | originally identified as acyl-CoA: cholesterol acyltransferase 1; correct nomenclature for this enzyme sterol O-acyltransferase 1 (SOAT1) |
ACAT2 | originally identified as acyl-CoA: cholesterol acyltransferase 2; correct nomenclature for this enzyme sterol O-acyltransferase 2 (SOAT2) |
ACAT1 | acetyl-CoA acetyltransferase 1; acetoacetyl-CoA thiolase, mitochondrial; involved in ketone body synthesis |
ACAT2 | acetyl-CoA acetyltransferase 2; acetoacetyl-CoA thiolase, cytoplasmic; involved in cholesterol biosynthesis |
ACC1 | acetyl-CoA carboxylase, strictly cytosolic, enriched in liver |
ACC2 | acetyl-CoA carboxylase, expressed in heart, liver, skeletal muscle, mitochondrial targeting motif, found associated with CPT I |
ACE | angiotensin converting enzyme |
ACH | achondroplasia, caused by defects in FGFR3 |
ACh | acetylcholine |
AChR | acetylcholine receptor |
ACOX1, 2, 3 | peroxisomal fatty acyl-CoA oxidase 1, 2, and 3 |
ACP | acyl-carrier protein |
ACTH | adrenocorticotropic hormone |
ACS | acyl-CoA synthetase |
ADA | adenosine deaminase |
ADBP | adenosine deaminase binding protein |
ADD1 | adipocyte differentiation 1; also called SREBP-1c |
ADH | antidiuretic hormone |
ADH | alcohol dehydrogenase; 7 ADH genes in humans, several exist in different polymorphic forms |
AdoMet | S-adenosylmethionine |
ADP | |
AEA | N-arachidonoylethanolamine, commonly called anandamide; is an endocannabinoid |
AGA | gene symbol for N-aspartyl-β-glucosaminidase |
AGL | gene symbol for amylo-1,6-glucosidase; also called glycogen debranching enzyme, GDE |
AgRP | agouti-related peptide, hypothalamic neuropeptide that antagonizes the activities of α-MSH |
AIP | |
AIS | androgen insensitivity syndrome |
Akt | first identified as oncogene in AKT8 virus isolated from an AKR mouse spontaneous thymoma; there are 3 members of the Akt family, Akt1, Akt2, and Akt3 with Akt1 being the original virus isolate; Akt2 is important for insulin signaling and presentation of GLUT4 transporters; also called protein kinase B, PKB |
ALA | δ-aminolevulinic acid |
ALAD | gene symbol for ALA synthase |
ALAS | δ-aminolevulinic acid synthase; ALAS1 and ALAS2 |
ALD | adrenoleukodystrophy |
ALDH | aldehyde dehydrogenase; involved in acetaldehyde metabolism, two types in humans: ALDH1A1 and ALDH2 |
ALT: SGPT | alanine transaminase: serum glutamate pyruvate transaminase |
ALG1 | gene symbol for asparagine-linked glycosylation gene 1; also called mannosyltransferase I (GDP-Man: GlcNAc2-P-P-Dol β-1,4-mannosyltransferase) |
ALG2 | gene symbol for asparagine-linked glycosylation gene 2; also called mannosyltransferase II (GDP-Man: Man1-GlcNAc2-P-P-Dol mannosyltransferase) |
ALG3 | gene symbol for asparagine-linked glycosylation gene 3; also called mannosyltransferase VI (Dol-P-Man: Man5-GlcNAc2-P-P-Dol mannosyltransferase) |
ALG6 | gene symbol for asparagine-linked glycosylation gene 6; also called glucosyltransferase I (Dol-P-Glc: Man9-GlcNAc2-P-P-Dol glucosyltransferase) |
ALG8 | gene symbol for asparagine-linked glycosylation gene 8; also called glucosyltransferase II (Dol-P-Glc: Glc1-Man9-GlcNAc2-P-P-Dol α-3-glucosyltransferase) |
ALG9 | gene symbol for asparagine-linked glycosylation gene 9; also called mannosyltransferase VII-IX (Dol-P-Man: Man6- and Man8-GlcNAc2-P-P-Dol mannosyltransferase) |
ALG12 | gene symbol for asparagine-linked glycosylation gene 12; also called mannosyltransferase VIII (Dol-P-Man: Man7-GlcNAc2-P-P-Dol α-6-mannosyltransferase) |
ALXR | lipoxin receptor |
AMPA | ionotropic glutamate receptor subtype originally shown to be activated by 2-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid |
AMPK | AMP-activated protein kinase |
ANF | atrial natriuretic factor; also called ANP for atrial natriuretic peptide |
ANP | atrial natriuretic peptide; also called ANF for atrial natriuretic factor |
APC | activated protein C |
APC | adenomatous polyposis coli gene, kinase that phosphorylates β-catenin |
APC | anaphase promoting complex |
AR | androgen receptor |
ARC | arcuate nucleus, region of the hypothalamus involved in feeding behavior |
ARF1 | ADP-ribosylation factor 1 |
ARG1 and ARG2 | gene symbols for arginase; ARG1 predominates in the liver, ARG2 encodes mitochondrial enzyme found primarily in the kidneys |
ARS | autonomously replicating sequence |
ARSA | gene symbol for arylsulfatase A; also known as cerebroside 3-sulfatase |
ARSB | gene symbol for arylsulfatase B |
AS | argininisuccinate synthetase |
ASBT | apical sodium-dependent bile salt transporter |
ASM | gene symbol for acid sphingomyelinase |
ASAH | gene symbol for acid ceramidase |
ASD | argininisuccinate synthetase deficiency |
AST: SGOT | aspartate aminotransferase: serum glutamate oxaloacetate transaminase |
AT | ataxia telangiectasia |
ATGL | adipose triglyceride lipase; also known as patatin-like phospholipase domain-containing protein A2 (PNPLA2) |
ATL | aspirin-triggered lipoxin |
ATM | ataxia telangiectasia mutated gene |
ATP10C | gene symbol for aminophosphoplipid-transporting ATPase; found in the imprinted region of chromosome 15 associated with PWS |
ATP2A1 | gene symbol for ATPase, Ca2+ transporting, fast-twitch; also called sarco/endoplasmic-reticulum calcium ATPase 1 (SERCA1) |
ATP2A2 | gene symbol for ATPase, Ca2+ transporting, slow-twitch; also called sarco/endoplasmic-reticulum calcium ATPase 2 (SERCA2) |
ATP2A3 | gene symbol for ATPase, Ca2+ transporting, ubiquitous; also called sarco/endoplasmic-reticulum calcium ATPase 3 (SERCA3) |
ATX | autotaxin: same as lysophospholipase D (lysoPLD) which is an ecto-nucleotide phosphodiesterase |
ATXN1 | gene symbol for ataxin-1; expansion of a CAG trinucleotide repeat in this gene causes spinocerebellar ataxia 1, SCA1 |
ATXN2 | gene symbol for ataxin-2; expansion of a CAG trinucleotide repeat in this gene causes spinocerebellar ataxia 2, SCA2 |
ATXN3 | gene symbol for ataxin-3; expansion of a CAG trinucleotide repeat in the this gene causes spinocerebellar ataxia 3, SCA3; SCA3 also known as Machado-Joseph disease, MJD |
ATXN7 | gene symbol for ataxin-7; expansion of a CAG trinucleotide repeat in this gene causes spinocerebellar ataxia 7, SCA7 |
ATXN8OS | gene symbol for ataxin-8 opposite strand lncRNA; expansion of a CTG trinucleotide repeat in this gene causes spinocerebellar ataxia 8, SCA8 |
ATXN1L | gene symbol for ataxin-1-like; also called brother of ataxin-1 (BOAT) |
AZT | azidothymidine; drug used in treating HIV infection |
B4GALT1 | gene symbol for β-1,4-galactosyltransferase |
BAT | brown adipose tissue |
BCAA | branched-chain amino acid |
BCKD | branched-chain α-ketoacid dehydrogenase |
BCKDHA | gene symbol for E1α subunit of branched-chain ketoacid dehydrogenase |
BCKDHB | gene symbol for E1β subunit of branched-chain ketoacid dehydrogenase |
Bcl | B-cell leukemia gene, found fused to Abl in chronic myelogenous leukemias due to chromosomal translocation |
BCR | break point cluster region |
BCSL1 | BCS1-like, member of the AAA family of ATPases, functions in formation of complex III of oxidative phosphorylation |
BH2 and BH4 | dihydro- and tetrahydrobiopterin, also abbreviated H2B and H4B |
bHLH | basic helix-loop-helix domain |
BLT1 and BLT2 | receptors for the leukotriene LTB4 |
BMP | bone morphogenetic protein |
BNP | brain natriuretic peptide |
BOAT | gene symbol for brother of ataxin-1; more commonly called ataxin-1-like (ATXN1L) |
BRSK | brain-specific serine/threonine kinase; BRSK1 and BRSK2 |
BSEP | bile salt export pump: also called ATP-binding cassette member B11 (ABCB11) |
BSS | Bernard-Soulier Syndrome Bernard-Soulier syndrome; also referred to as giant platelet syndrome |
BUN | blood urea nitrogen |
BWS | Beckwith-Wiedemann syndrome |
CaCM | calcium calmodulin |
CAH | congenital adrenal hyperplasia |
CAK | CDK-activating kinase |
CAMK1 | Ca2+/calmodulin-dependent kinase 1 |
CaMKKβ | Ca2+-calmodulin-dependent kinase kinase-β |
cAMP | cyclic AMP |
CAPN10 | calpain 10: polymorphisms associate with increased diabetes risk |
CAR | constitutive androstane receptor |
CART | cocaine and amphetamine-regulated transcript; hypothalamic neuropeptide involved in feeding behavior |
CACT | carnitine-acylcarnitine translocase; SLC25A20 |
CAT | carnitine acyltransferase |
CBS domain | cystathionine β-synthase domain |
CCK | cholecystekinin |
CDC | cell division cycle |
CDG | congenital disorder of glycosylation |
CDK | cyclin-dependent kinase |
CDKAL1 | cyclin-dependent kinase-5 [CDK5] subunit associated protein 1-like 1: polymorphisms associated with increased diabetes risk |
CDKN1B | also known as p57KIP2 which is a cyclin-dependent kinase inhibitory protein |
CDKN1C | also known as p27KIP1 which is a cyclin-dependent kinase inhibitory protein; found in the imprinted region of chromosome 11 associated with BWS |
CDKN2B | cyclin-dependent kinase inhibitor 2B: polymorphisms associate with increased diabetes risk |
CD-MPR | cation-dependent mannose-6-phosphate receptor |
C/EBP | CCAAT/enhancer binding protein |
CELF | CUG-BP/ETR-3-like family of proteins involved in RNA splicing, RNA editing and translation |
CEN | centromere |
CEP | congenital erythropoietic porphyria |
CETP | cholesterol ester transfer protein |
CGI-58 | comparative gene identification-58; official gene name is α/β-hydrolase domain-containing protein-5, ABHD5 |
cGMP | cyclic GMP |
CGRP | calcitonin gene related peptide |
ChE | cholinesterase |
CHK2 | check point kinase 2 |
ChREBP | carbohydrate-response element binding protein |
CHO | Chinese hamster ovary |
CI-MPR | cation-independent mannose-6-phosphate receptor |
CK | creatine kinase |
CK | casein kinase |
CMOAT | gene symbol for canalicular multispecific organic anion transporter; also called ATP-binding cassette, subfamily C, member 2 gene, ABCC2 or multidrug resistance-associated protein 2 gene, MRP2 |
CNBr | cyanogen bromide |
CNS | central nervous system |
COMT | catecholamine-O-methyltransferase |
COMP | cartilage oligomeric matrix protein; also referred to as thrombospondin 5 (TSP5) |
COPI | coatamer protein coat-complex I |
COPII | coatamer protein coat-complex II |
CoQ | coenzyme Q; ubiquinone |
COX1 | cyclooxygenase 1 |
COX2 | cyclooxygenase 2 |
CP | creatine phosphate |
CpG | designates the dinucleotide which often contains methylated C residues |
CPK or CK | creatine phopshokinase: creatine kinase |
CPO | gene symbol for coproporphyrinogen oxidase |
CPS1 and CPS2 | gene symbols for carbamoylphosphate synthetase I and II; CPSI is found in the mitochondria and functions in the urea cycle; CPSII is cytosolic and functions in pyrimidine nucleotide synthesis |
CPSD | carbamoylphosphate synthetase 1 (CPS) deficiency |
CPT or CA | carnitine palmitoyltransferase: carnitine acyltransferase, 2 forms CPT-1 (or CPT-I) and CPT-2 (or CPT-II) |
CPU | carboxypeptidase U |
CRBP | cellular retinol binding protein |
CREB | cAMP response element-binding protein |
CRF or CRH | corticotropin-releasing hormone (factor) |
CRIM | cross-reactive immunological material; term used in descriptions of different types of acute intermittent prophyria, AIP |
CSF | colony stimulating factor |
CT | calcitonin |
CUG-BP1 | CUG binding protein 1 |
CYP | nomenclature prefix for cytochrome P450 class of enzymes |
CYP7A1 | cholesterol 7-hydroxylase; rate-limiting enzyme of classic pathway for bile acid synthesis |
CYP7B1 | oxysterol 7α-hydroxylase; enzyme in acidic pathway of bile acid synthesis |
CYP8B1 | sterol 12α-hydroxylase; bile acid synthesizing enzyme |
CYP11A1 | P450 side-chain cleavage enzyme, also called desmolase, cholesterol desmolase, 20,22 desmolase; involved in adreanl steroid hormone biosynthesis |
CYP11B1 | 11β-hydroxylase, also called P450c11; involved in adrenal steroid hormone biosynthesis |
CYP11B2 | aldosterone synthase, also 18α-hydroxylase or P450c18; involved in adreanl steroid hormone biosynthesis |
CYP17A1 | has 2 activities: 17α-hydroxylase and 17,20-lyase, also called P450c17; involved in adrenal steroid hormone biosynthesis |
CYP19A1 | aromatase, also called estrogen synthetase; involved in adreanl steroid hormone biosynthesis |
CYP21A2 | 21-hydroxylase; involved in adreanl steroid hormone biosynthesis; also known as CYP21 and CYP21B |
CYP27A1 | sterol 27-hydroxylase; initial enzyme of acidic pathway for bile acid synthesis |
CysLT1 and CysLT2 | receptors for peptidoleukotrienes which are also called cysteinyl leukotrienes |
D5W | dextrose 5% water |
DAF: CD55 | decay accelerating factor |
DAG | diacylglycerol |
DAGL | diacylglycerol lipase |
DBD | DNA-binding domain |
DBP | D-bifunctional protein; involved in peroxisomal fatty acid β-oxidation |
DBT | gene symbol for E2 subunit of branched-chain ketoacid dehydrogenase |
DCC | deleted in colorectal carcinoma; tumor suppressor gene |
DDx | differential diagnosis |
DHA | docasahexaenoic acid; important omega-3 fatty acid |
DHAP | dihydroxyacetone phosphate |
DHAPAT | dihydroxyacetone phosphate acyltransferase |
DHEA | dehydroepiandosterone |
DHEA-S | dehydroepiandosterone sulfate |
DHF | dihydrofolate |
DHFR | dihydrofolate reductase |
DHPR | dihydropteridine reductase |
DHT | dihydrotestosterone |
DKA | diabetic ketoacidosis |
DLAT | dihydrolipoyl transacetylase, gene symbol for the E2 subunit of several dehydrogenases such as pyruvate dehydrogenase, α-ketoglutarate dehydrogenase (also known as 2-oxoglutarate dehydrogenase), and branched-chain ketoacid dehydrogenase |
DLD | dihydrolipoyl dehydrogenase, gene symbol for the E3 subunit of several dehydrogenases such as pyruvate dehydrogenase, α-ketoglutarate dehydrogenase (also known as 2-oxoglutarate dehydrogenase), and branched-chain ketoacid dehydrogenase |
DM1 | dystophia myotonica 1; more commonly called myotonic dystrophy type 1 |
DMH | dorsomedial hypothalamic nucleus; involved in stimulating gastrointestinal activity |
DMPK | gene symbol for dystrophia myotonica protein kinase gene; also identified as Mt-PK |
DMPP | dimethylallyl pyrophosphate |
DMR | differentially methylated region |
DMT1 | divalent metal transporter 1 |
DNP | dinitrophenol; compound that uncouples electron flow from ATP production |
DOC | deoxycorticostereone |
Dol | dolichol |
DOPA | 3,4-dihydrophenylalanine |
DPAGT1 | gene symbol for UDP-GlcNAc: Dol-P-GlcNAc-P phosphotransferase |
DPM1 | gene symbol for catalytic subunit of Dol-P-Man synthase I (GDP-Man: Dol-P mannosyltransferase 1); enzyme complex composed of at least three subunits identified as DPM1, DPM2, and DPM3 |
DPP4: DPP IV | dipeptidylpeptidase 4 |
DRPLA | Dentatorubral-Pallidoluysian atrophy |
DSI | depolarization-induced suppression of inhibition; a term relating to neurochemical transmission in the CNS |
DTT | dithiothreitol |
EAAT1 | excitatory amino acid transporter 1 |
EAAT2 | excitatory amino acid transporter 2 |
ECM | extracellular matrix |
EDG | endothelial differentiation gene; GPCRs referred to as the EDG cluster; EDG-2 (LPA1), EDG4 (LPA2), and EDG7 (LPA3) bind lysophosphatidic acid (LPA); EDG-1, -3, -5, -6, and -8 bind sphingosine-1-phosphate (S1P) |
EDRF | endothelium derived relaxing factor |
EDS | Ehlers-Danlos syndrome |
eEF | eukaryotic translation elongation factor |
EGF | epidermal growth factor |
eIF | eukaryotic translation initiation fator |
EMeg32 | Erythroid and Megakaryocytic lineages, clone 32; also known as glucosamine 6-phosphate N-acetyltransferase (GNPNAT1) |
EPA | eicosapentaenoic acid; important omega-3 fatty acid |
EPI | extrinsic pathway inhibitor |
EPO | erythropoietin |
EPP | erythropoietic porphyria |
ER | endoplamic reticulum |
ER | estrogen receptor |
ERCC | excision repair cross complementing 1 gene; the ERCC genes are also called excision repair, complementing defective, in Chinese hamster |
ERK | extracellular signal-regulated kinase |
ERR | estrogen related receptor |
ERT | enzyme replacement therapy |
F8 | gene symbol for coagulation factor VIII gene |
F9 | gene symbol for coagulation factor IX gene |
F10 | gene symbol for coagulation factor X gene |
F11 | gene symbol for coagulation factor XI gene |
F12 | gene symbol for coagulation factor XII gene |
F13 | gene symbol for coagulation factor XII gene |
F1,6,BP | fructose-1,6-bisphophate |
F1,6BPase | fructose-1,6-bisphosphatase |
F1P | fructose-1-phosphate |
F2,6BP | fructose-2,6-bisphosphatase |
F6P | fructose-6-phosphate |
FAAH | fatty acid amide hydrolase |
FABPc | cytosolic fatty acid-binding protein |
FABPpm | plasma membrane-associated fatty acid-binding protein |
FADH2 | flavin adenine dinucleotide |
FAP | familial adenomatous polyposis |
FAPα | fibroblast activation protein alpha |
FAS | fatty acid synthase |
FAT | fatty acid translocase, also known as class B scavenger receptor CD36 |
FATP | fatty acid transport protein; six family members FATP1 – FATP6 |
FBN1 | gene symbol for fibrillin |
FBN2 | gene symbol for a gene highly homologous to fibrillin but on a different chromosome; defects in FBN2 result in contractural arachnodactyly |
FECH | gene symbol for ferrochelatase |
FGF | fibroblast growth factor |
FGFR | fibroblast growth factor receptor |
FH | familial hypercholesterolemia |
FIZZ | found in inflammatory zone: a family of proteins that includes resistin which is also called FIZZ3 |
FK506 | an immunophilin, suppressor of immune responses like rapamycin |
FKBP | FK506 binding protein |
FKHRL1 | fork-head domain containing transcription factor; member of the FoxO family and identified as FoxO3a |
FLAP | 5-lipoxygenase (5-LOX) activating protein |
FMN | flavin mononucleotide |
FMR1 | gene symbol for fragile X messenger ribonucleoprotein 1; trinucleotide repeat in this gene cause fragile X syndrome |
FMR2 | alternative gene symbol for FRAXE gene |
FMRP | protein product of the FMR1 gene |
FOS | oncogene originally identified as causative agent in Finkel-Biskis-Jinkins (FBJ) murine osteogenic sarcoma virus |
FoxO1 | transcription factor of the forkhead domain containing transcription factor family; called the FoxO family; also called FKHR |
FoxO3A | transcription factor of the forkhead domain containing transcription factor family; called the FoxO family; also called FKHRL1 |
FPG | fasting plasma glucose |
FPP | farnesyl pyrophosphate |
FPR | formyl peptide receptor |
FRAP | FKBP12-rapamycin associated protein |
FRAXA | fragile X syndrome locus that belongs to the class of folate-sensitive rare fragile sites |
FRAXE | fragile XE mental retardation locus that belongs to the class of folate-sensitive rare fragile sites |
FRDA | Friedreich ataxia |
FSH | follicle-stimulating hormone |
Fuc | fucose |
FUCA1 | gene symbol for α-fucosidase-1 |
FUCT1 | gene symbol for GDP-fucose transporter; also identified as solute carrier family 35, member C1: SCL35C1 |
FXN | gene symbol for frataxin |
FXR | farnesoid X receptor |
G0S2 | G0/G1 switch protein 2; peptide inhibitor of adipose triglyceride lipase (ATGL) expressed by mononuclear cells |
G I | glucosidase I |
G II | glucosidase II |
G1P | glucose-1-phosphate |
G3P | glyceraldehyde-3-phosphate |
G6P | glucose 6-phosphate |
G6PC | gene symbol for glucose 6-phosphatase |
G6PD | gene symbol for glucose 6-phosphate dehydrogenase |
G6PDH | glucose 6-phosphate dehydrogenase |
G6PT1 | gene symbol for glucose 6-phosphate transporter 1 |
GAA | gene symbol for α-glucosidase |
GABA | γ-amino butyric acid |
GAD | glutamic acid decarboxylase |
GAG | glycosaminoglycan |
GAL | galanin |
GALC | gene symbol for galactosylceramidase; formally identified as galactocerebroside β-galactosidase |
GalNAc | N-acetylgalactosamine |
GALNS | gene symbol for N-acetylgalactosamine 6-sulfatase, also called galactose 6-sulfatase |
GALP | galanin-like peptide |
GAP | GTPase activating protein |
GAPDH | glyceraldehyde-3-phosphate dehydrogenase |
GATA1 - GATA6 | family of transcription factors defined by the presence of the consensus sequence WGATAR (W = T or A; R = G or A) |
Gb3 | globotriaosylceramide; predominant glycolipid accumulating in Fabry disease, a lysosomal storage disease |
GBA | gene symbol for acid β-glucosidase; also called glucocerebrosidase |
GBD | glycogen-binding domain |
GBE1 | gene symbol for glycogen branching enzyme; also called amylo-(1,4 to 1,6) transglycosylase |
GBF1 | Golgi Brefeldin A resistance factor; is a guanine nucleotide exchange factor |
GCC | glycine cleavage complex |
G-CSF | granulocyte colony stimulating factor |
GDE | glycogen debranching enzyme; also called amylo-1,6-glucosidase, AGL |
GEF | guanine nucleotide exchange factor |
GFAT | glutamine:fructose-6-phosphate aminotransferase 1; also identified as GFPT1 |
GFPT1 | glutamine:fructose-6-phosphate aminotransferase 1; more commonly identified as GFAT |
GH | growth hormone, also called somatotropin |
GIH | growth hormone-inhibiting hormone, same as somatostatin; also called GIF for growth hormone-inhibiting factor |
GIP | glucose-dependent insulinotropic peptide; used to be called gastric inhibitory peptide |
GLA | gene symbol for α-galactosidase A |
GLB1 | gene symbol for β-galactosidase-1 |
GlcNAc | N-acetylglucosamine |
GLD | globoid cell leukodystrophy; commonly known as Krabbe disease |
GLP-1 | glucagon-like peptide 1 |
GLP-2 | glucagon-like peptide 2 |
GLS1 | gene symbol for glucosidase I (G I) |
GLUT | glucose transporter, at least 14 members, common are GLUT1 through GLUT5 |
GM2A | gene symbol for GM2 activator |
GM-CSF | granulocyte-macrophage colony stimulating factor |
GNPAT | gene symbol for dihydroxyacetone phosphate acyltransferase (for glyceronephosphate O-acyltransferase) |
GNPNAT1 | gene symbol for glucosamine 6-phosphate N-acetyltransferase; also commonly called EMeg32 (Erythroid and Megakarocytic lineage clone 32) |
GnRF or GnRH | gonadotropin-releasing hormone (factor) |
GNS | gene symbol for N-acetylglucosamine 6-sulfatase |
GP1BA | gene symbol for GPIbα which is member of the platelet surface glycoprotein complex composed of GPIbα, GPIbβ, GPIX and GPV |
GP1BB | gene symbol for GPIbβ which is member of the platelet surface glycoprotein complex composed of GPIbα, GPIbβ, GPIX and GPV |
GP3A | gene symbol for GPIIIa (β3) which encodes a protein of the platelet surface glycoprotein complex, GPIIb-GPIIIa, that is a member of integrin family of cell surface receptors and is also called the αIIb-β3 integrin receptor; also identified by gene symbol ITGB3 |
GP5 | gene symbol for GPV which is member of the platelet surface glycoprotein complex composed of GPIbα, GPIbβ, GPIX and GPV |
GP9 | gene symbol for GPIX which is member of the platelet surface glycoprotein complex composed of GPIbα, GPIbβ, GPIX and GPV |
GPAT | glycerol-3-phosphate acyltransferase |
GPD1 | gene encoding cytoplasmic form of glycerol-3-phosphate dehydrogenase |
GPD2 | gene encoding mitochondrial form of glycerol-3-phosphate dehydrogenase |
GPCR | G-protein coupled receptor |
GPI | glycosylphosphatidylinositol |
GPx1 | glutathione peroxidase 1; catalyzes the reduction of organic hydroperoxides and hydrogen peroxide by glutathione; additional glutatjhione peroxidase genes include GPx3, GPx4, and GPx5 |
GR or GCCR | glucocorticoid receptor |
GRACILE | growth retardation, aminoacidurina, cholestasis, iron overload, lactic acidosis, early death |
Grb2 | growth factor receptor-bound protein 2; a cytoplasmic adaptor protein that links EGFR (epidermal growth factor receptor) and PDGFRB (platelet-derived growth factor β-receptor) to RAS and RAC signaling pathways, and is involved in mitogenesis and cytoskeletal reorganization; contains two SH3 and one SH2 domain |
GRH | growth hormone releasing hormone |
GRK3 | G-protein coupled receptor kinase 3 |
GS | glycogen synthase |
GSD | glycogen storage disease |
GSH | glutathione |
GSK3 | glycogen synthase kinase-3 |
GSK4 | glycogen synthase kinase-4 |
GSSG | oxidized glutathione |
GUSB | gene symbol for β-glucuronidase |
| |
H2B and H4B | dihydro- and tetrahydrobiopterin, also abbreviated BH2 and BH4 |
HADHA | hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase, alpha subunit; alpha subunit of the mitochondrial trifunctional protein (MTP) that catalyzes the last three steps of mitochondrial fatty acid β-oxidation |
HADHB | hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase, beta subunit; beta subunit of the mitochondrial trifunctional protein (MTP) that catalyzes the last three steps of mitochondrial fatty acid β-oxidation |
HAMP | gene symbol for hepcidin |
Hap1 | huntingtin-associated protein 1 |
HbA1c | glycosylated hemoglobin |
HbF | designates fetal hemoglobin |
HBP | hexosamine biosynthesis pathway |
HbS | designates hemoglobin form in sickle cell disease |
hCG | human chorionic gonadotropin |
HCI or HCR | heme-controlled inhibitor; heme controlled repressor |
HCP | hereditary coproporphyria |
HD | Huntington disease |
HDAC | histone deacetylase |
HDL | high density lipoporotein |
HEMPAS | hereditary erythroblastic multinuclearity with positive acidified-serum test, same as congenital dyserythropoietc anemia type II |
HETE | hydroxyeicosatetraenoic acid |
HEXA | gene symbol for α-subunit of β-hexosaminidase |
HEXB | gene symbol for β-subunit of β-hexosaminidase |
HFCS | high fructose corn syrup |
HFE1 | inherited hemochromatosis susceptibility gene; encodes an α-chain protein with three immunoglobulin-like domains that associates with β2-microglobulin |
HFE2A | juvenile hemochromatosis type 2A resulting from defects in hemojuvelin gene (HJV) |
HFE2B | juvenile hemochromatosis type 2B resulting from defects in hepcidin gene (HAMP) |
HFE3 | type 3 hemochromatosis resulting from defects in transferrin receptor-2 gene (TFR2) |
HFE4 | type 4 hemochromatosis, also called ferroportin disease because it is caused by mutations in the ferroportin, the ferroportin gene is also identified as IREG1 (iron-regulated gene 1), MTP1 (reticuloendothelial iron transporter), SLC11A3 [solute carrier family 11 (iron-regulated transporter), member 3], and SCL40A1 [solute carrier family 40 (iron-regulated transporter), member 1] |
HGF | hepatocyte growth factor |
HGO | gene symbol for homogentisic acid oxidase |
HGSNAT | gene symbol for acetyl-CoA:α-glucosaminide acetyltransferase; also called heparan-α-glucosaminide N-acetyltransferase; has also been called transmembrane protein 76 (TMEM76) |
HHEX | hematopoietically expressed homeobox: polymorphisms associate with increased diabetes risk |
HIV | human immunodeficiency virus |
HJV | gene symbol fo rhemojuvelin |
HMBS | gene symbol for hydroxymethylbilane synthase; also known as porphobilinogen deaminase, PBGD |
HMG-CoA | hydroxymethylglutaryl-CoA, 3-hydroxy-3-methyl glutaryl-CoA |
HMGR | HMG-CoA reductase, 3-hydroxy-3-methylglutaryl-CoA reductase |
HMIT | proton (H+) myoinositol symporter: SLC2A13 |
HMWK | high molecular weight kininogen |
HNF1α | hepatocyte nuclear factor-1α |
HNF4α | hepatocyte nuclear factor-4α |
hnRNP | heteronuclear ribonuclear protein |
HOMT | hydroxyindole-O-methyltransferase |
HPA | hyperphenylalaninemia |
HPETE | hydroperoxyeicosatetraenoic acid |
HPFH | hereditary persistence of fetal hemoglobin |
hPL | human placental lactogen |
HPLC | high-performance (or pressure) liquid chromatography |
HPRT | gene symbol for hypoxanthine-guanine phosphoribosyltransferase (HGPRT) |
HRE | hormone response element |
HSD17B3 | gene symbol for 17β-hydroxysteroid dehydrogenase type 3 |
HSD3B2 | gene symbol for 3β-hydroxysteroid dehydrogenase |
HSL | hormone-sensitive lipase |
HTGL | hepatic triglyceride lipase |
HTLV | human T-cell leukemia virus |
HTT | gene symbol for huntingtin |
IAA | insulin auto-antibodies: anti-insulin antibodies |
IBABP | ileal (intestinal) bile acid binding protein; also known as fatty acid-binding protein 6: FABP6 |
ICAM-1 | intercellular cell adhesion molecule-1 |
ICCA | islet cell cytoplasmic antibodies |
ICSA | islet cell surface antigen |
IDDM | insulin-dependent diabetes mellitus; more commonly termed type 1 diabetes |
IDH | isocitrate dehydrogenase |
IDS | gene symbol for iduronate sulfatase |
IDUA | gene symbol for α-L-iduronidase |
IGF-1 | insulin-like growth factor 1 |
IGF-2 | insulin-like growth factor 2 |
IGFBP2 | insulin-like growth factor binding protein 2: polymorphisms associated with increased diabetes risk |
IL | interleukin |
INF or IF | interferon: α-IF are leukocyte-derived, β-IF are fibroblast-derived, γ-IF are lymphocyte derived |
INSIG | insulin-induced gene |
IP3 | inositol-1,4,5-trisphosphate |
IRBP | iron response element binding protein |
IRE | iron response element |
IREG1 | gene symbol for iron-regulated transporter 1; is also called ferroportin 1, reticuloendothelial iron transporter (MPT1), solute carrier family 11 (iron-regulated transporter), member 3 [SLC11A3], or solute carrier family 40 (iron-regulated transporter), member 1 [SLC40A1] |
IRS1 – IRS4 | insulin receptor substrate-1, -2, -3, and -4 |
ISC | Fe-S type iron sulfur center |
ITGA2B | gene symbol for GPIIb (αIIb) which encodes a protein of the platelet surface glycoprotein complex, GPIIb-GPIIIa, that is a member of integrin family of cell surface receptors and is also called the αIIb-β3; also has the gene symbol GP3A integrin receptor |
ITGB3 | gene symbol for GPIIIa (β3) which encodes a protein of the platelet surface glycoprotein complex, GPIIb-GPIIIa, that is a member of integrin family of cell surface receptors and is also called the αIIb-β3 integrin receptor; also identified by gene symbol GP3A |
JH | juvenile hemochromatosis |
JNK | JUN N-terminal kinase |
JUN | a kinase that was originally identified as a retroviral oncogene; JUN is Japanese for five |
KCNJ11 | potassium inwardly-rectifying channel, subfamily J, member 11: forms the core of the K+-ATP channel involved in pancreatic secretion of insulin: polymorphisms associate with increased diabetes risk |
KCNQ1 | gene symbol for a subunit of a voltage-gated potassium channel, was previously called KvLQT1; found in the imprinted region of chromosome 11 associated with BWS |
KCNQ10T1 | gene symbol for a gene present in intron 10 of the KCNQ1 gene that encodes a non-coding RNA expressed in the antisense direction relative to KCNQ1; found in the imprinted region of chromosome 11 associated with BWS |
KD | kilodalton |
αKGDH | α-ketoglutarate dehydrogenase |
KHK | ketohexokinase; two isoforms KHK-A and KHK-C, phosphorylate fructose |
Kir6.2 | same as KCNJ11 |
LACI | lipoprotein-associated coagulation inhibitor |
LAD | leukocyte adhesion deficiency |
LAL | lysosomal acid lipase; important lysosoaml enzyme involved in lipid metabolism; deficiency in LAL results in Wolman disease |
LBD | ligand-binding domain |
LBP | L-bifunctional protein; involved in peroxisomal fatty acid β-oxidation |
LCAD | long chain acylCoA dehydrogenase |
LCAT | lecithin cholesterol acyltransferase |
LCFA | long-chain fatty acid |
LCK | Lystra cell kinase: pronounced "lick" |
LCR | ligase chain reaction |
LDH | lactate dehydrogenase |
LDL | low density lipoprotein |
LDLR | low density lipoprotein receptor |
LFA-3 | lymphocyte function associated antigen-3 |
LH | luteinizing hormone |
LHRH | luteinizing hormone releasing hormone |
LKB1 | liver kinase B1; kinase that phosphorylates AMPK and AMPK-related kinases; also known as serine threonine kiase 11 (STK11) and the Peutz-Jaeger syndrome (PJS) gene product |
LLO | lipid-linked oligosaccharide; also called the en bloc oliogosaccharide |
LMWK | low molecular weight kininogen |
LNS | Lesch-Nyhan syndrome |
LOX | lipoxygenase; 3 members of enzyme family: LOX-5, LOX-12 and LOX-15 |
LP | lysophospholipid |
LPA | lysophospholipid receptor |
Lp-PLA2 | lipoprotein-associated phospholipase A2 |
LPC | lysophosphatidylcholine |
LPH | lipotropin |
L-PK | liver isoform of pyruvate kinase |
LPL | lipoprotein lipase |
LPL | lysophospholipid |
Lp-x | lipoprotein X; found in the circulation of patients suffering from LCAT deficiency or cholestatic liver disease |
LT | leukotriene |
LTR | long terminal repeat; elements found at the ends of retroviral genomes, act as strong transcriptional promoters |
LX | lipoxin |
LXR | liver X receptor |
MAGEL2 | gene symbol for MAGE-like protein 2 where MAGE family are melanoma antigen proteins; found in the imprinted region of chromosome 15 associated with PWS |
Man | mannose |
MAN2B1 | gene symbol for α-mannosidase |
MANBA | gene symbol for β-mannosidase |
MAO | monoamine oxidase |
MAPK | microtubule-associated protein kinase: mitogen-activated protein kinase |
MAPK | mitogen-activated protein kinase; microtubule-associate protein kinase |
MARK | microtubule affinity-regulating kinase; MARK1 through MARK4 |
MBNL | Muscleblind-like; a protein involved in the regulation of alternative splicing |
MCAD | medium-chain acyl-CoA dehydrogenase |
MCD | malonyl-CoA decarboxylase |
MCH | melanin concentrating hormone |
M-CSF | macrophage colony stimulating factor |
MDH | malate dehydrogenase |
MDM2 | ubiquitin ligase originally isolated from mouse tumorigenic cell line 3T3DM |
MDR | medium-chain dehydrogenase/reductase; superfamily of enzymes that includes the alcohol dehydrogenases (ADH) |
MDR3 | multidrug resistance protein 3: also called ATP-binding cassette member B4, ABCB4 |
MeCP2 | methyl Cp-binding protein 2 |
MEF-2 | myocyte enhancer factor-2 |
MELK | maternal embryonic leucine zipper kinase |
MEOS | microsomal ethanol oxidizing system |
MFS | Marfan syndrome |
MGAT2 | gene symbol for UDP-N-acetylglucosamine:α-6-D-mannoside-β-1,2-N-acetylglucosaminyltransferase II (GlcNAc-TII) |
MGEA5 | meningioma-expressed antigen 5 gene; also known as OGA (O-GlcNAcase, β-N-acetylglucosamindase) |
MGL | monoacylglyceride lipase |
mGluR | metabotropic glutamate receptor |
MHC | major histocompatibility complex |
miRNA | micro RNA |
MKP-1 | mitogen-activated protein kinase (MAPK) phosphatase-1 |
MKRN3 | gene symbol for makorin ring finger protein 3; member of a family of ubiquitin ligases; found in the imprinted region of chromosome 15 associated with PWS |
MLCK | myosin light-chain kinase |
MLD | Metachromatic leukodystrophy |
MMR | mismatch repair |
Mnk1 and Mnk2 | MAP-interacting kinases; these phosphorylate eIF-4E |
MO25 | mouse protein 25 |
MODY | maturity onset type diabetes of the young |
MPDU1 | gene symbol for Man-P-Dol utilization defect 1 |
MPI | gene symbol for phosphomannose isomerase |
MPR | mannose 6-phosphate receptor |
MPS | mucopolysaccharidosis; lysosomal storage diseases |
MR | mineralocorticoid receptor |
mRNA | messenger RNA |
MRP2 | gene symbol for multidrug resistance associated protein 2; also called ATP-binding cassette, sub-family C, member 2, ABCC2 or canalicular multispecific organic anion transporter gene, CMOAT |
MSH | melanocyte-stimulating hormone |
MSUD | maple syrup urine disease |
MTMR1 | myotubularin related protein 1; myotubularin is a phosphoserine and phosphotyrosine phosphatase |
mTOR | mammalian target of rapamycin |
mTORC1 | mammalian target of rapamycin complex 1 |
mTORC2 | mammalian target of rapamycin complex 2 |
MTP | mitochondrial trifunctional protein; carries out the last three reactions of mitochondrial fatty acid β-oxidation |
MYC | proto-oncogene first identified in avian myelocytomatosis virus: pronounced "mick" |
NADH and NAD+ | nicotinamide adenine dinucleotide |
NADPH and NADP+ | nicotinamide adenine dinucleotide phosphate |
NAE | N-acylethanolamine |
NAGLU | gene symbol for α-N-acetylglucosaminidase |
NALD | Neonatal adrenoleukodystrophy |
NAM | nicotinamide |
NAPE | N-acylphosphatidylethanolamine |
NAPE-PLD | N-acylphosphatidylethanolamine-specific phospholipase D |
N-CAM | neural cell adhesion molecule |
NCoR | nuclear receptor corepressor 1 |
NDN | gene symbol for necdin; a growth suppressor expressed predominantly in postmitotic neurons; found in the imprinted region of chromosome 15 associated with PWS |
NE | niacin equivalents |
NEDD | neural precursor cell expressed, developmentally down-regulated |
NEDD8 | member of the NEDD gene family originall characterized as neural precursor cell expressed, developmentally down-regulated gene; this member is 80% homologous to ubiquitin and is added to proteins by ubiquitin ligase family enzymes targeting the proteins for degradation as in the case of ubiquitinylation; process termed neddylation |
NEU1 | gene symbol for neuraminidase |
NF1 | neurofibromatosis type 1 |
NFκB | nuclear factor kappa B |
NGF | nerve growth factor |
NGFR | nerve growth factor receptor |
NIDDM | non-insulin-dependent diabetes mellitus; more commonly termed type 2 diabetes |
NMDA | ionotropic glutamate receptor subtype originally shown to be activated by N-methyl-D-aspartate |
NMN | nicotinamide mononucleotide |
NO | nitric oxide |
NOS | nitric oxide synthase: 3 types: nNOS (neuronal NOS, NOS-1) iNOS (inducible NOS, NOS-2), eNOS (endothelial NOS, NOS-3) |
NP-A | Niemann-Pick disease type A |
NP-B | Niemann-Pick disease type B |
NP-C | Niemann-Pick disease type C |
NPC1 | gene symbol for defective gene associated with Niemann-Pick disease type C |
NPC2 | gene symbol for defective gene associated with Niemann-Pick disease type C; was originally identified as the lysosomal glycoprotein, epididymal secretory protein (HE1) |
NP-D | Niemann-Pick disease type D |
NPY | neuropeptie tyrosine |
NSAID | non-steroidal anti-inflammatory drug |
NTCP | Na+-taurocholate cotransporting polypeptide: also called SLC10A1 for solute carrier family 10 (sodium/bile acid cotransporter) family member 1 |
NTS | neurotensin |
NUAK | nuclear AMPK-related kinase; NUAK1 and NUAK2 |
OAA | oxaloacetic acid |
OATP1B1 | Na+-independent organic anion transporting polypeptide 1B1; gene symbol is SLCO1B1 |
ODC | ornithine decarboxylase |
OGA | O-GlcNAcase; β-N-acetylglucosamindase; also known as MGEA5 for meningioma-expressed antigen 5 gene |
OGT | O-GlcNAc transferase; UDP-N-acetylglucosamine:polypeptide β-N-acetylglucosaminyltransferase |
OGTT | oral glucose tolerance test |
OI | osteogenesis imperfecta |
Opn | osteopontin |
OSCP | oligomycin sensitivity-conferring protein; a protein that connect the F1 and F0 proteins of ATP synthase in the mitochondria |
OTC | ornithine transcarbamoylase |
OTCD | ornithine transcarbamoylase deficieny |
P450c11 | proper nomenclature is CYP11B1; 11β-hydroxylase |
P450c17 | has 2 activities: 17α-hydroxylase and 17,20-lyase; properly called CYP17A1 |
P450c18 | proper nomenclature is CYP11B2: aldosterone synthase, also 18α-hydroxylase |
P450c21 | proper nomenclature is CYP21A2: 21-hydroxylase; also called CYP21 or CYP21B |
P450ssc | proper nomenclature is CYP11A1: P450 side-chain cleavage enzyme, also called desmolase, cholesterol desmolase, and 20,22 desmolase |
p70S6K | small ribosomal subunit protein S6 kinase |
PABP | polyA-binding protein |
PAF | platelet activating factor |
PAGE | polyacrylamide gel electrophoresis |
PAGM | phosphohexosamine mutase, enzyme in the hexosamine biosynthesis pathway, HBP |
PAH | phenylalanine hydroxylase |
PAHX | gene symbol for phytanoyl-CoA hydroxylase; also identified as PHYH |
PAI | plasminogen activator inhibitor; PAI-1, PAI-2 |
PAP1 | phosphatidic acid phosphatase |
PAPS | 3'-phosphoadenosine-5'-phosphosulfate |
PAR | protease-activated receptor; PAR-1, PAR-3, and PAR-4 are receptors to which thrombin binds, PAR-2 is activated by trypsin-like serine proteases |
PBD | peroxisome biogenesis disorder |
PBG | porphobilinogen |
PBGD | gene symbol for porphobilinogen deaminase; also known as hydroxymethylbilane synthase, HMBS |
PC | pyruvate carboxylase |
PCK1 | gene encoding the cytosolic form of phosphoenolpyruvate carboxykinase |
PCK2 | gene encoding the mitochondrial form of phosphoenolpyruvate carboxykinase |
PcG | polycomb group |
PCOS | polycystic ovarian syndrome |
PCR | polymerase chain reaction |
PCR-SSCP | technique using PCR to amplify a segment of DNA followed by SSCP analysis by gel electrophoresis |
PCT | porphyria cutanea tarda |
PD | protectin |
PDE | phosphodiesterase |
PDGF | platelet-derived growth factor |
PDGFR | platelet-derived growth factor receptor |
PDH | pyruvate dehydrogenase |
PDK, PDK1 | PIP3-dependent protein kinase |
PDK1, PDK2, PDK3, PDK4 | pyruvate dehydrogenase kinases |
PDP | pyruvate dehydrogenase phosphatase |
PEP | phosphoenoylpyruvate |
PEPCK | phosphoenolpyruvate carboxykinase |
PERC | PGC-1-related estrogen receptor-α co-activator |
PET | positron emission tomography |
PEX | designation for peroxisomal proteins |
PFGE | pulsed-field gel electrophoresis; used for electrophoretic separation of large DNA pieces |
PFK-1 | 6-phosphofructo-1-kinase |
PFK-2 | 6-phosphofructo-2-kinase |
PG | prostaglandin |
PGAM1 | phosphoglycerate mutase |
PGC-1α | PPARγ coactivator-1α |
PGC-1β | PPARγ coactivator-1β |
PGK | phosphoglycerate kinase |
PGS | prostaglandin synthase; prostaglandin endoperoxide synthetase |
PHAS | Propertiesof Heat and Acid Stability: PHAS was the original designation for eIF-4 binding proteins now called 4EBPs |
PHI | phosphohexose isomerase, converts glucose-6-phosphate (G6P) to fructose-6-phosphate (F6P) |
PHLDA2 | gene symbol for plekstrin homology-like domain, family A, member 2; found in the imprinted region of chromosome 11 associated with BWS |
PhyH | phytanoyl-CoA hydroxylase |
PHYH | gene symbol for phytanoyl-CoA hydroxylase; also identified as PAXH |
PI3K | phosphoinositide-3-kinase, made up of p85 regulatory subunit, polypeptide 1 (p85-a); 85 kDa; binds to tyrosine kinase receptors. PI3K is also made up of a catalytic subunit; 110 kDa |
PIF | prolactin-release inhibiting factor |
PIH | prolactin inhibiting hormone |
PIP2 | phosphatidylinositol-1,4-bisphosphate |
PIP3 | phosphatidylinositol-1,4,5-trisphosphate |
PJS | Peutz-Jeghers syndrome gene, also known as LKB1 and STK11; is a kinase that phosphorylates AMPK and AMPK-related kinases |
PK | pyruvate kinase |
PKA | cAMP-dependent protein kinase |
PKB | protein kinase B, first identified as oncogene in AKT8 virus isolated from an AKR mouse spontaneous thymoma; there are 3 members of the Akt family, Akt1, Akt2, and Akt3 with Akt1 being the original virus isolate; Akt2 is important in insulin-mediated glucose homeostasis |
PKC | Ca2+-phospholipid-dependent protein kinase |
PKD | DNA-dependent protein kinase |
PKG | cGMP-dependent protein kinase |
PKU | phenylketonuria |
PLA2 | phospholipase A2 |
PLCG | gene symbol for phospholipase C-γ |
PLD | phospholipase D |
PLE | protein losing enteropathy |
PLP | pyridoxal phosphate |
PMF | proton motif force |
PMM2 | gene symbol for phosphomannomutase 2 |
PMN | polymorphonuclear leukocyte |
PMP35 | peroxisomal membrane protein 3; also identified as PXMP3 or PEX3 |
PNS | peripheral nervous system |
PNPLA2 | patatin-like phospholipase domain-containing protein A2; more commonly called adipose triglyceride lipase (ATGL) |
POMC | pro-opiomelanocoticotropin |
PON1 | paraoxonase 1; hydrolyzes oxon metabolites of organophosphates, hydrolyzes aromatic esters preferably of acetic acid, hydrolyzes a variety of aromatic and aliphatic lactones, and catalyzes the lactonization of γ- and δ-hydroxycarboxylic acids; there are three PON genes, PON1, PON2, and PON3, all aligned next to each other on chromosome 7 |
POR | gene symbol for cytochrome P450 oxidoreductase; a flavoprotein that donates electrons to all microsomal P450 enzymes such as CYP17A1, CYP21A2, and CYP19A1 |
PP | pancreatic polypeptide |
PP-1 | protein phosphatase 1 |
PP2C | protein phosphatase 2C |
PPAR | peroxisome proliferator-activated receptor: PPARα, PPARβ/δ, PPARγ |
PPARA | gene symbol for peroxisome proliferator-activated receptor-α |
PPARα | peroxisome proliferator-activated receptor-α |
PPARβ/δ | peroxisome proliferator-activated receptor-β/δ |
PPARD | gene symbol for peroxisome proliferator-activated receptor-δ |
PPARG | gene symbol for peroxisome proliferator-activated receptor-γ |
PPARγ | peroxisome proliferator-activated receptor-γ |
PPCA | protective protein/cathepsin A |
PPI-1 | protein phosphatase inhibitor 1 |
PPP | pentose phosphate pathway |
PPP2R2B | gene symbol for protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform; trinucleotide repeat gene causing spinocerebellar ataxia 12 (SCA12) |
PPO | protoporphyrinogen oxidase |
PPOX | gene symbol for protoporphyrinogen oxidase |
PPRE | peroxisome proliferator-activated receptor response element |
PR or PGR | progesterone receptor |
PRC | PGC-1 related coactivator |
PRF | prolactin-releasing factor |
PRKAG2 | gene symbol for γ2 subunit of AMPK |
PRPP | 5'-phosphoribosyl-1'-pyrophosphate |
PRPS | gene symbol for 5'-phosphoribosyl-1'-pyrophosphate synthetase |
PRL | prolactin |
PSP | protein serine/threonine phosphatase |
PTEN | phosphatase and tensin homology protein |
PTG | protein targeting glycogen |
PTGS | posttranscriptional gene silencing |
PTH | parathyroid hormone |
PTK | protein tyrosine kinase |
PTP | protein tyrosine phosphatase |
PTS1 | peroxisomal targeting sequence 1 |
PTS2 | peroxisomal targeting sequence 2 |
PUFA | polyunsaturated fatty acid |
PVN | paraventricular nucleus, hypothalamic region involved in oxytocin and vasopressin release |
PWS | Prader-Willi syndrome |
PXMP3 | peroxisomal membrane protein 3; also identified as PMP35 or PEX3 |
PXR | pregnane X receptor |
PYGM | gene symbol for muscle phosphorylase |
PYY | peptide tyrosine tyrosine |
QIK | Qin-induced kinase, more commonly called SIK2 for salt-induced kinase 2 |
QSK | more commonly called SIK3 for salt-induced kinase 3 |
R5P | ribose-5-phosphate |
RAR | retinoic acid receptor |
RB | retinoblastoma |
RBC | red blood cell |
RBP | retinol binding protein |
RCDP1 | Rhizomelic chondrodysplasia punctata type 1 |
RDS | respiratory distress syndrome |
RER | rough endoplasmic reticulum |
RFLP | restriction fragment length polymorphism |
RHEB | RAS homolog enriched in brain |
RING | Really Interesting New Gene |
RING domain | zinc-finger-like domain found in 275 different proteins many of which are ubiquitin ligases |
RIP-140 | receptor-interacting protein 140 |
RITS | RNA-induced transcriptional silencing complex |
RNAi | RNA-interference |
ROR | retinoid-related orphan receptor |
rRNA | ribosomal RNA |
RSK2 | p90 small ribosomal protein S6 kinase; also functions as a histone phosphorylating enzyme |
RSS | Russell-Silver syndrome |
RT | reverse transcription, reverse transcriptase |
RTK | receptor tyrosine kinase |
RT-PCR | reverse transcription followed by polymerase chain reaction |
RXR | retinoid X receptor |
RYR1 | ryanodine receptor 1 |
S1P | sphingosine-1-phosphate |
S6K | p70 small ribosomal subunit protein S6 kinase |
SAM | S-adenosylmethionine |
SAR1 | small GTP-binding protein 1 |
SBMA | spinobulbar muscular atrophy |
SCA | spinocerabellar ataxia |
SCAD | short chain acylCoA dehydrogenase |
SCAP | SREBP cleavage-activating protein |
SCD | stearoyl-CoA desaturase |
SCF | ubiquitin ligase complex: cell cycle regulatory enzyme complex, named after its 3 main protein subunits = Skp1/Cullin/F-box protein; cullin also called cdc53; F-box is a domain in many proteins; the F-box in SCF in yeast is cdc4; the F-box protein called Skp2 is a component of the human S-phase CDK complex |
SCID | severe combine immunodeficiency |
SCP2 | gene symbol for sterol carrier protein (SCP)-2/3-oxoacyl-CoA thiolase |
SCPx | sterol carrier protein (SCP)-2/3-oxoacyl-CoA thiolase |
SDH | succinate dehydrogenase |
SDS | sodium dodecylsulfate |
SDS-PAGE | protein electrophoresis technique where proteins are uniformly negatively charged by SDS |
SERCA1 | gene symbol for sarco/endoplasmic-reticulum calcium ATPase 1; also called ATPase, Ca2+ transporting, fast-twitch 1 |
SERCA2 | gene symbol for sarco/endoplasmic-reticulum calcium ATPase 2; also called ATPase, Ca2+ transporting, slow-twitch 2 |
SERCA3 | gene symbol for sarco/endoplasmic-reticulum calcium ATPase 3; also called ATPase, Ca2+ transporting, ubiquitous |
SGLT2 | sodium-glucose co-transporter: target for treatment of hyperglycemia in diabetes |
SGOT | serum glutamate oxalate transaminase |
SGPT | serum glutamate pyruvate transaminase |
SGSH | gene symbol for heparan N-sulfatase, also called sulfamidase or N-sulfoglucosamine sulfohydrolase |
SH2 | SRC-homology domain 2 |
SH3 | SRC-homology domain 3 |
SHC1 | gene encoding SHC adapter protein 1; an SH2 domain-containing protein; humans express four SHC adapter proteins (SHC1, SHC2, SHC3, and SHC4) |
SHH | sonic hedgehog |
SHP | small heterodimer partner |
SIF | somatostatin, same as GIF |
SIK | salt-induced kinase; SIK1, SIK2(QIK) and SIK3(QSK) |
siRNA | small inteferring RNA |
SIRT1 to SIRT7 | sirtuin family members; enzymes are NAD+-dependent deacetylases; SIRT1 it the human homolog of the yeast (S. cerevisiae ) Sir2 gene: Silent mating type Information Regulator 2 |
SLC10A1 | solute carrier family 10 (sodium/bile acid cotransporter) family member 1; also called NTCP for Na+-taurocholate cotransporting polypeptide |
SLC11A3 | solute carrier family 11 (iron-regulated transporter), member 3; also known as iron-regulated gene 1 (IREG1), ferroportin, reticuloendothelial iron transporter (MPT1), or solute carrier family 40 (iron-regulated transporter), member 1 [SLC40A1] |
SLC2A1 | solute carrier family 2, member A1: GLUT1 |
SLC2A13 | same as HMIT |
SLC2A2 | solute carrier family 2, member A2: GLUT2 |
SLC2A3 | solute carrier family 2, member A3: GLUT3 |
SLC2A4 | solute carrier family 2, member A4: GLUT4 |
SLC2A5 | solute carrier family 2, member A5: GLUT5 |
SLC22A18 | solute carrier family 22 (organic cation transporter), member 18; found in the imprinted region of chromosome 11 associated with BWS |
SLC30A8 | solute carrier family 30 [zinc transporter], member 8: polymorphisms associated with increased diabetes risk |
SLC35C1 | solute carrier family 35, member C1; also identified as GDP-fucose transporter: FUCT1 |
SLC40A1 | solute carrier family 40 (iron-regulated transporter), member 1; also known as as iron-regulated gene 1 (IREG1), ferroportin, reticuloendothelial iron transporter (MPT1), and solute carrier family 11 (iron-regulated transporter), member 3 |
SLC6A19 | solute carrier family 6 member 19; mutation in gene associated with Hartnup disorder |
SLCO1B1 | gene symbol for Na+-independent organic anion transporting polypeptide 1B1, OATP1B1, also previously called OATP-C |
SLE | systemic lupus erythematosis |
SMAX1 | spinal and bulbar muscular atrophy, X-linked 1; more commonly called spinobulbar muscular atrophy |
SMRT | silencing mediator of retinoid and thyroid hormone receptor |
SNA | serotonin N-acetylase |
SNARE | soluble-N-ethylmaleimide-sensitive factor attachment protein receptor |
SNARK | SNF1/AMPK-related kinase, more commonly called NUAK2 which is nuclear AMPK-related kinase |
SNF | sucrose non-fermenting; this is a chromosome remodeling complex protein |
snoRNA | small nucleolar RNAs that guide methylation or pseudouridylation of rRNAs and other small nuclear RNAs (snRNA) |
SNP | single nucleotide polymorphism |
snRNA | small nuclear RNAs |
SNRPN | small nuclear ribonuclear protein N; found in the imprinted region of chromosome 15 associated with PWS |
SNURF | SNRPN upstream reading frame; found in the imprinted region of chromosome 15 associated with PWS |
SOAT1 | sterol O-acyltransferase 1; originally identified as acyl-cholesterol: acyltranferase 1, ACAT1 |
SOAT2 | sterol O-acyltransferase 2; originally identified as acyl-cholesterol: acyltranferase 2, ACAT2 |
SOCS | suppressor of cytokine signaling |
SPC | sphingosylphosphorylcholine |
SR | sarcoplasmic reticulum |
SRC | archetypal tyrosine kinase first identified in avian sarcoma virus: pronounced "sark" |
SRD5A2 | gene symbol for 5α-reductase type 2 |
SREBP | sterol-response element binding protein |
SRP | signal recognition particle |
SRSA | slow-reacting substance of anaphylaxis |
SSCP | single-strand conformational polymorphism |
SSD | sterol sensing domain |
SSRI | selective serotonin reuptake inhibitor |
StAR | steroidogenic acute regulatory protein; rate-limiting enzyme of steroidogenesis |
STAT | signal transducers and activators of transcription |
STK11 | serine-threonine kinase 11; also known as Peutz-Jaeger syndrome gene and LKB1; is a kinase that phosphorylates AMPK and AMPK-related kinases |
STRAD | Ste20-related adaptor |
SULT2A1 | sulfotransferase; enzyme adds sulfur to DHEA generating DHEA sulfate (DHEA-S) |
SUR | sulfonylurea receptor; also called ABCC8 which is a component of the K+-ATP channel involved in insulin secretion from pancreas |
SWI | switching of mating type, chromosome remodeling complex protein |
| |
T3 | triiodothyronine |
T4 | thyroxine |
TAG: TG | triacylglyceride; triglyceride; triacylglycerol |
TAK1 | transforming growth factor-β-activated kinase 1 |
TAT | tyrosine aminotransferase |
TBP | TATA-box binding protein |
TCF7L2 | transcription factor 7-like 2 [T-cell specific HMG-box]: polymorphisms associate with increased diabetes risk: 1 of 4 TCF proteins involved in Wnt signaling |
TCR | T-cell antigen receptor |
TEL | telomere |
TFII | transcription factors that regulate the activity of RNA polymerase II |
TFM | testicular feminization syndrome |
TFPI | tissue factor pathway inhibitor |
TFR1 | gene symbol for transferrin receptor 1 |
TFR2 | gene symbol for transferrin receptor 2 |
TGF | transforming growth factor |
TGFBR1 | gene symbol for transforming growth factor-β1 binding protein |
TGF-α | transforming growth factor-α |
TGF-β | transforming growth factor-β |
TGR5 | transmembrane G-protein coupled bile acid receptor |
THF | tetrahydrofolate |
THP | tryptophan hydroxylase |
TNDM | transient neonatal dibetes mellitus |
TNF | tumor necrosis factor, α and β |
TNF-α | tumor necrosis factor-α |
TNF-β | tumor necrosis factor-β |
TORC1 | transducer of regulated CREB activity 1 |
TORC2 | transducer of regulated CREB activity 2 |
tPA | tissue plasmogen activator |
TPP | thiamine pyrophosphate |
TPR | tetratricopeptide repeat domains, functional domains found in OGT (O-GlcNAc transferase |
TRH or TRF | thyrotropin-releasing hormone (factor) |
tRNA | transfer RNA |
TSAb | thyroid stimulating autoantibodies; bind to TSH receptor mimicking TSH action, leads to hyperthyroidism of Graves disease |
Tsc1 and Tsc2 | tuberous sclerosis tumor suppressor proteins, Tsc1 = hamartin, Tsc2 = tuberin |
TSH | thyroid-stimulating hormone |
TSP | thrombospondin: five family members, TSP1, TSP2, TSP3, TSP4, and COMP (cartilage oligomeric matrix protein; also referred to as TSP5) |
TZD | thiazolidinedione |
UBE3A | gene symbol for ubiquitin ligase E3A; gene involved in the imprinted disease known as Angelman syndrome |
UCD | urea cycle disorder |
UCP1 | uncoupling protein 1, also called thermogenin |
UGT | UDP-glucuronyl transferase |
UIM | ubiquitin interacting motif |
UPD | uniparental disomy |
UROD | gene symbol for uroporphyrinogen decarboxylase |
UROS | gene symbol for uroporphyrinogen III synthase |
UTR | untranslated region; includes both 5'-UTR and 3'-UTR |
VCAM | vascular cell adhesion molecule |
VDR | vitamin D receptor |
VEGF | vascular endothelial growth factor |
VHL | von Hippel Lindau |
VIP | vasoactive intestinal peptide |
VLACSR | very long-chain acyl-CoA synthetase-related protein; also known as very long-chain acyl-CoA synthetase homolog 2 (VLCSH2); also known as fatty acid transport protein 5 (FATP5) |
VLCAD | very long chain acylCoA dehydrogenase |
VLCFA | very long-chain fatty acid |
VLCS | very long-chain acyl-CoA synthetase; also known as fatty acid transport protein 2 (FATP2) |
VLCSH1 | very long-chain acyl-CoA synthetase homolog 1; also known as fatty acid transport protein 6 (FATP6) |
VLCSH2 | very long-chain acyl-CoA synthetase homolog 2; also known as very long-chain acyl-CoA synthetase-related protein (VLACSR); also known as fatty acid transport protein 5 (FATP5) |
VLDL | very low density lipoprotein |
VMN | ventromedial nucleus; hypothalamic region involved in satiety (sensation of being full) |
VNTR | variable number tandem repeat |
VP | variegate porphyria |
VSGP | vertical supranuclear gaze palsy |
VWD | von Willebrand disease |
vWF | von Willebrand factor |
WAT | white adipose tissue |
Wnt | family of proteins whose name is derived from an amalgam of wingless and int; wingless is a fruit fly gene essential for segment pattern and int refers to a hot-spot for virus integration in the mouse |
WT1 | Wilms tumor 1 |
X-ALD | X-linked adrenoleukodystrophy |
XLSA | X-linked sideroblastic anemia |
XP | xeroderma pigmentosa |
YAC | yeast artificial chromosome |
ZWS | Zellweger syndrome |